SynBioSS Designer Tutorial (Step 1/3)
The first step is to input the BioBricks for the network:
It is important to enter the parts in order, from left to right. To input a brick in the web interface, simply type in the brick's ID
and select its "type" (e.g. promoter). The GFP generator is input as follows (clicking the 'Add Biobrick' button for each
brick):
The "Current BioBricks" table should now look like this:
As indicated here, the Designer needs additional information on coding DNA and promoters. For coding DNA, the user must input the
protein which is produced; in this case, it is GFP. To input this information, select the coding DNA's ID (E0040) from the drop-down
menu in the "Coding DNA Specifics" section, enter the protein's name (GFP), and click "Add Protein".
For promoters, the user must input the operator sites on the promoter. This information can be found at the promoter's page on the Parts Registry. This promoter contains two operator sites. To
input them, select the promoter's ID (R0040) from the drop-down menu in the "Promoter Specifics" section, enter the operator's name,
and click "Add Operator". The order of the operators does not matter, nor do their names. We shall call them tetO1 and tetO2:
The "Current BioBricks" table is now complete:
Proceed to Step 2...